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… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … seeks to expand our understanding of algal biology using genomics and multi-omics by working with research labs and …

… work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … and other natural product libraries, so not relying on single crystal X-ray diffraction, but looking actually at …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … what their role in nature, how have they been selected for or how do they evolve, all those things. So that’s what … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … individual user facilities. A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests …

… so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds …

… be successful. Right? Because we don’t – drugs are usually single molecules, they are not extracts. And so yeah, in … in ourselves and every living thing that we know of with cells, and so… So you can think of DNA as maybe being … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …

… to sort of compare, conceptually, that data with genomics and the kind of things that I do with genome … both of those things have still very much done to be excellently. Dan Udwary: For sure. Kate Duncan: Not that … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. …

… to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and the development of new … seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: Importance of Sample QC …