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The JGI Project Management Office carries out a number of activities to facilitate … approved proposal – including the submission of samples for sequencing, or the submission of sequencing data for … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers … “Now with these new tools — metatranscriptomics, RNA sequencing of soil RNA — we can access — ‘What are they …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … biosynthetic gene clusters (BGCs) across all kingdoms of life. Tools are provided to display annotation data from …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – to get …

The JGI Project Management Office carries out a number of activities to facilitate … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … new. And that is to begin to study the organic chemistry of life in the sea. And he looked at me and he said, you know, … time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, …

… manager may then schedule and allocate resources for DNA sequencing. … No. However, the JGI does maintain a list of … Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In general, data … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a … (Berkeley Lab), has generated a more accurate phylogenetic tree tracking the evolution of  Dothideomycetes fungi. The  … supported by the NSF grants  DEB-1354625 and  IOS-1456958 . Sequencing of  Dothideomycetes genomes were conducted as …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we talked about sponges, go pull a sponge or extract some tree bark. And so you’re just taking something, you’re … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences …

… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality … all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data …

Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …