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… agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton … Plant Flagship Genomes are selected through discussion with the JGI Plant … Advisory Committee and DOE, designating a set of JGI plant genomes that are the most important to DOE mission and plant …

… capillary), researchers sequenced and assembled the first complete genome of an uncultured symbiont. The single cell … identify, and characterize more than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … genome sequence, in about 40% of the genome the genes were completely unidentifiable. You had no idea what they were … I will say that my experience with mass spectrometry was nearly identical to most others where the mass spectrometer …

… and materials. The proposal submission deadline is March 31, 2026 .  … and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … (CMMs). Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect most …

… Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … overall that the British approach at that time was quite linear and that people would take problems. And they would … database which is now shared with the whole community in a completely free and open manner. But it is also …

… the University of Hawaii and moved there in the early ’60s from Berkeley to work on this new budding field of marine … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … about five and a half million base pairs. It was not linear, like Streptomyces , but circular. 10% of the genome …

… yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … why we had the idea that the microviridins also could be completely different compounds. But that got at the idea …

… The guest we have this week is Professor Cassandra Quave from Emory University, with joint appointments in the School … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … it’s very hard. And it’s still not something that we’ve completely been able to tackle. And so – ALISON: So I do …

… week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … it turns out that a lot of natural products are built up from amino acids, so they’re secondary metabolite peptides. … when we went looking for a photo of John, we found one from the 70s in the Scripps library, and in it he’s got …

… the Letter of Intent; rather proposals are submitted in a single step. … The ranked proposal list, along with a recommendation from management at JGI and the other participating … more customized analysis, the JGI also participates in publication of results. …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … for microbial eukaryotes, build fungal and algal pangenomes, and integrate multi-omics tools to enhance …