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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science … genomes . The Impact The microbes that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated by viruses in … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … of marine organisms, as well as contributing to nutrient cycling in these ecosystems. Researchers studied P. …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … oxygen deep below ground. These archaea fix carbon and nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This action triggers subsurface carbon cycling, releasing fresh organic carbon which can serve as a …
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Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , JGI User …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. … diversity within secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, …
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A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … diverse substrates, and also photosynthesis genes including potential light-driven proton pumps. “We’re seeing that this … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Virus Discoveries that Keep Getting Bigger
… work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … hosts. In doing so, they influence ecosystem-level nutrient cycling and carbon storage. For example, the marine algae  … that viruses are more abundant than previously thought, and potentially even more abundant than bacteria. A fourth …
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The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on … geographic coordinates which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues … preliminary model aligns with several other studies on the potential effects of warming oceans on the microbial …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … the FICUS program to JEM and used resources at the DOE Joint Genome Institute (JGI) and the Environmental Molecular …
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