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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … mission, we recognize success is dependent on earning the trust of our stakeholders. These stakeholders range from …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 …
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Phylogenetic and phylogenomic overview of the Polyporales
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … working on that aspect and it’s quite active against some fungi. But we’re also really interested in distribution. So …
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Phylogenetic and Phylogenomic Definition of Rhizopus Species
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On the origin of bird’s nest fungi: Phylogenomic analyses of fungi in the Nidulariaceae (Agaricales, Basidiomycota)
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy.
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Genome-scale phylogenetics reveals a monophyletic Zoopagales (Zoopagomycota, Fungi)
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for … penicillin from the fungal species – probably told us that fungi could be very productive sources for, say, biological …
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