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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … cell genomics, DNA synthesis, and metabolomics.   … Deputy of Genomic Technologies …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … They’re at the base of the animal kingdom, in terms of evolution. Because they’re sitting there, they tend to have … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … near this tree and so there was probably some historical evolutionary event where the DNA transferred from the fungus …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. …
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Natural Prodcast Episode 17: Cassandra Quave
I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … mixed powders, my immediate thought was this is going to revolutionize plant natural products work. And I’m always …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … change etc) and structural rearrangements, alignment files 114/114 Microbial Transcriptome RNA for expression profiling …
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