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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic science projects that address … to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, … metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to …
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Natural Prodcast Episode 14: Nigel Mouncey
I got him on to talk about JGI’s vision for secondary metabolism, his past in industry in developing natural … I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as … works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT …
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Genome-centric view of carbon processing in thawing permafrost
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome … products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural Prodcast, … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science … offers a first glimpse into a full season’s cycle of this polar environment. This cycle suggests a reliance on … Wales, Australia, and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … of media, ITS sequencing and tissue preparation), allowing participation from a growing audience. For consistency and …
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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and biogeochemistry. In … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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JGI Portals
… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … Data Portal to eventually replace the Genome Portal. … GOLD is a web resource for comprehensive access to information … Resources … Mycocosm … Phycocosm … Phytozome … Secondary Metabolism Collaboratory …
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