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… to find info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … – that there are some very specific patterns and shared DNA across all of these things. It turns out secondary … to be here and be able to discuss this incredible, natural diversity that we have at our fingertips. So I’m very …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …

… The focus of this group, in recent years, has been to bring generalizable … to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …

… the DNA that was breaking the sequencing from really being functional was these secondary metabolite pathways. So why … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And … similar to like human crops like corn. There’s low genetic diversity in the crop. So they’re susceptible to disease. …

… Did the global analysis of biosynthetic gene clusters across, well, at that time, all genomes that were out there. … you to get a bird’s-eye perspective on the biosynthetic diversity element of these genomes. And you see how they’re– … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This represents a … The JGI supports remote users. Users conduct experiments in their own labs or collect field samples. Depending on the …

… about the field of biocatalysis and what needs to be done across science to to get a point where we can predict an … made it onto our list is because we wanted to have diversity. And so we wanted a profile across that protein … interesting. ALISON NARAYAN: It is a result that has a functional benefit for us, being chemists working with …

… that morning cup of coffee, that is a plant that has a functional activity. It’s a pharmacological agent that acts … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …

… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate … into biological function. The  New Investigator and Functional Genomics calls do not require an LOI.  Projects …

… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students … Beyond providing a scalable solution for production of high-quality … fungal reference genomes, this program is an important initiative that expands and diversifies workforce training …