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How to Submit Sequencing Samples
… is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC … requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation Guidelines RNA …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint … that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … see things that maybe aren’t real, and so it’s thought that based on historical records and weather recordings of the …
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JGI Advisory Committees Code of Conduct
… , which guide the relationships we nurture in our workplace and seek to establish with our stakeholders. In working … and civility in all discussions and debate; Make decisions based on merit of issues; Act honestly, transparently, and … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users … science including technical capabilities offered, proposal review procedures and the annual user meeting. The UEC also …
Learn more
Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint … metabolites are being produced in the environment for ecological reasons. ALISON: Can you give me an example?  … I did want to impress, too, is that secondary metabolism is based on primary metabolism. It’s an evolution of primary …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint … by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … ALISON: You know, clearly you both have thought about the ecological theory and evolutionary theory that relates to …
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JGI Portals
… are a key resource for the broader scientific community and require constant developments to meet the ever-changing … fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome … the functional capability of microbial communities based on their metagenome sequence, in the context of …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … to really challenge me, and as being sort of a laboratory based scientist, to get out onto the ocean and do ocean …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … How can you design a drug, right? You design drugs  based on certain knowledge, without which, you know… If you … predict where in particular areas, or particularly as by ecological niches, the natural product could be there. So …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is understanding the distributed and dynamic metabolite networks of …
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User Executive Committee Charter
Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users … science including technical capabilities offered, proposal review procedures, and the annual user meeting. The UEC also …
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Mission
Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … metabolomics and computational analysis that enable systems-based scientific approaches to these challenges.     Our …
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