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Industry Engagement Program
… JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions … Our metabolomics platform delivers rich metabolite profiles from diverse biological and environmental samples by using … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… And with Christian, I started getting a little bit more into fungi and learning the differences of all the genetic … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … my career. So when I was at URI, University of Rhode Island, and I was a assistant professor– I was working on a …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host … fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … roots are akin to the ground floor lobby. People walking into the lobby have many reasons for being there, but …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, … — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) …
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JGI-TMF Critical Minerals and Materials Call
… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, … JGI scientists as needed), and the work plan is written into a Statement of Work document. …
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The Marchantia polymorpha pangenome reveals ancient mechanisms of plant adaptation to the environment
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Insights into convergent evolution of cosexuality in liverworts from the Marchantia quadrata genome
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Natural Prodcast Episode 2: The Primer, Part 2
… basic ideas of the science of natural products, and we dive into the very early history of the field. If you continue … and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … metabolism is based on primary metabolism. It’s an evolution of primary metabolism. So a lot of the genes and …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a … The ranked proposal list, along with a recommendation from management at JGI and the other participating … JGI scientists as needed), and the work plan is written into a Statement of Work document. …
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Examples: Successful LOIs & Submissions
… calls. These documents have been shared with permission from the PIs who drafted them.  … to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway edited populus … to soil carbon storage during simulated range shifts of plant-fungal symbionts …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … research; the vast majority of projects fall into this category. Users are responsible for their own …
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