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IMG/M: a data management and analysis system for metagenomes
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … metagenome workflow . mSystems 6(3). 10.1128/MSYSTEMS.00804-20 Nayfach S et al.  A Genomic Catalog of Earth’s … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … for the U.S. Department of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and … this information freely to the public databases. In 2004, the JGI established itself as a national user facility, …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … through global metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of …
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Disclaimer
NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … Now when I was in fourth year, we had a choice to do an integrated master’s program that was by the Royal Society of … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 17: Cassandra Quave
… can’t recommend it enough to this audience. The hardcover version is out now in stores and online, and there’s an … she has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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IMG: the integrated microbial genomes database and comparative analysis system
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … a long time whenever you did a genome sequence, in about 40% of the genome the genes were completely unidentifiable. …
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