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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … to offer you. So there’s a lot of– we also have a lot of analysis pipelines, be it for, again, metagenome, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … the most effective application, of marine molecules in general. DAN UDWARY: Maybe can you explain to our audience … pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything about the …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … J., Terry, A. et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431, 268–274 (2004). …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … papers [on] recently – on evolution of biosynthetic gene clusters. And you and I have had some arguments over beers …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary … is that it was found that most biosynthetic genes are found clustered in the DNA. And so if you can identify a gene …
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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex … hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix …
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CSP Functional Genomics
Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values , which guide the … you in support of team science and service for the good of humanity. Sincerely, The JGI Leadership Team : Nigel …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in … at Lawrence Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet … a very high quality reference S. viridis genome sequence. Analysis of these plant genome sequences also led …
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