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… Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome …

… Investigator Providing a general orientation to JGI systems to Investigators Preparation of formal Statement of … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … to study river microbiomes. To understand the microbiology of watershed systems, they utilized over 160 river …

… provides customized analysis, the JGI also participates in publication of results. Go here for a video and Q&A with …

… And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to … there have been huge advances in both. The cool thing about genomes is you can, well, if your assembly is good, you can … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… his upcoming new role as the Society for Industrial Microbiology and Biotechnology’s (SIMB) new President-elect. I … work. And I think as we understand more about regulatory systems that will also help us predict which hosts might be … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . …

… provides customized analysis, the JGI also participates in publication of results. …

… materials, inter-organismal interactions, and predictive biology, modeling and biodesign — questions of relevance to … feedstock crops or model plants. Projects targeting marine systems must clearly demonstrate relevance and translatability to freshwater, coastal, or terrestrial systems. …

… DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they … I know a lot of sequencing is needed to be able to map that evolutionary tree to better understand these pathways and …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a …

… be possible to make an argument for the use of biological systems to leach and concentrate less valuable metals or … for 3 years with the possibility for extension. Fungal genomes, for instance, can take up to a year or more to …