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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in … of complete or near-complete population genomes directly from the environment. These advances have led to …
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Secondary Metabolites Program
… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … sustainable agriculture, and other fields reliant on natural product chemistry. These efforts will contribute to … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and …
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Products
… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … available for all proposal calls.   Please review the call language carefully to ensure that your request is … by physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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Partnerships: Myco-Ed
… consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: … isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist …
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Institutional User Agreements
… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial … Before work can begin on proposals submitted by researchers from another DOE National Laboratory, a JGI-BDLUA ,  BDLUA …
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DNA Synthesis Program
DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … challenges. Through innovative research in synthetic biology, the program enables the design and synthesis of … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …
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User Support
… submission Tracking, monitoring and expediting laboratory processing Consulting with investigators or DOE JGI staff to … specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Fungal & Algal Program
… applications, including sustainable biofuels, biomaterials, natural products, and environmental solutions, fostering a … The program seeks to expand our understanding of algal biology using genomics and multi-omics by working with … is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international …
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Meeting Code of Conduct
… tolerate the harassment of participants in any form. Sexual language and imagery is not appropriate during any aspect of … Participants violating these rules may be expelled from the event at the discretion of the event staff. … and actions. Attempt collaboration before conflict. Refrain from demeaning, discriminatory, or harassing behavior and …
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Data Policy
PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … repositories until the earliest of three points:  (1) publication of the data (including, but not limited to, … Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically …
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New Lineages of Life Group
… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved … nucleus of amoebae. The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the …
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Data Ecosystem
… … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go well … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to … Energy Research Scientific Computing Center … DOE System Biology Knowledgebase … National Microbiome Data …
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