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Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of … these hidden biochemical resources by exploring the genetic pathways responsible for their synthesis. The Secondary … compounds. To support users, our efforts include developing computational tools for predicting biosynthetic gene …

To expand access to integrated data, improve tools and infrastructure as well as … systems-level modeling and understanding. JGI and KBase are designated DOE Office of Science Public Reusable Research …

… all scientists have the expertise and resources to do DNA design and synthesis work. This is where the U.S. Department … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …

JGI Mission As a U.S. Department of Energy Office of Science user … The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and computational analysis that enable systems-based scientific …

The JGI Project Management Office carries out a number of activities to … with JGI scientific and technical experts Project design with Principal Investigator Providing a general … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

Plants are complex organisms that harbor a fantastic diversity … transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better understand the … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… … DAN UDWARY: It’s been a while, but Natural Prodcast is back … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … questions about appropriateness of projects or experimental design, you’re invited to contact Tanja directly, or for …

… or dedicated compute infrastructure is required to perform computational analyses. The Mycocosm user interface is designed for use by mycologists and researchers, … platform through the KBase Educators Community. This group enables instructors to create and share teaching resources …

… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … currently exist. We looked at chemistry, so it’s really novel. And they’re just really exciting. And it really kind … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… … DAN: You’re listening to the US. .Department of Energy Joint … or the other out. But if you’re smart about experimental design, you can start to get at that in certain systems. So … For sure.  MARC: We were basically, Dan and I and one other computational biologist were tasked with looking at, you …

Software engineers in the Synthetic Biology Informatics Group … includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and …