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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … in terms of the annotate, the assembly, the curation, QC, annotation of these data sets. For our eukaryotes, in … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … its major branches for users to characterize and propagate annotations across fungi. Myco-Ed Genomics Initiative   …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … public. Things that you do to BGCs– you can add your own annotations and do things to the data — That all becomes … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … Yeah, dad never forced it on me, but we always had these scientific news magazines lying around at home. And I would … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Partners
… has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data infrastructure …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … serves as a community resource for comparative analysis and annotation of all publicly available genomes from three …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome … … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … Metabolomics Program in …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical … networks of environmental microbes and how they transform their environment. Research Team    … For further …
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User Executive Committee Charter
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … users and their science including technical capabilities offered, proposal review procedures, and the annual user … acts as a liaison to the user community and the broader scientific community and promotes communication and …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … symbionts deeply branching in the Gammaproteobacteria. Scientific reports. 5 (1), 1-10 Schulz et al. (2014) Life in …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … to make the technology available to the broad – the common scientific community. And that also goes true for the …
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Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata
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