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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer … than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences … to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and connect with Lab …
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Biotech Partners
Biotech Partners provides integrated and high-touch programs that empower … They encourage students to pursue personal, academic, and professional development experiences through in-classroom … to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and gain connections …
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CalTeach
CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on … to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and gain connections …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … coelicolor versus Streptomyces lividans. They both have the genes. The genes are pretty much 100% identical. We don't … bind similar ligands. And so one of-- DAN: OK. The similar proteins are going to bind similar molecules. Yeah, OK. …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all that stuff. And …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … in terms of the annotate, the assembly, the curation, QC, annotation of these data sets. For our eukaryotes, in … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Data Policy & Support
… practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … mining-based approaches are that other than resistance genes, you have no way of knowing of whether or not a … or you could look at metabolism markers like phosphoprotein S6. So if there is a perturbagen present– DAN …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … to better understand microbial communities by looking at protein function within them. The work was led by a team of … call “known knowns” — that is, they are similar to genes with known function. Others are called ‘known …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download PDF] Q4 – Report on a …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases … – similar to the MAC clusters for 6mA), rather than in genes, which suggests that 5mC may play a role in genome …
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