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… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

… was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. …

… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …

The JGI’s Metabolomics Program works to uncover the roles of … molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …

Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview … sequencing, new sequencing technologies, and related informatics; overview of the scientific programs at the JGI; … and Environmental Research (BER) program, set the final sequence allocation for this program. …

The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and … Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our work at the …

The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … train students and professors in laboratory techniques and data analyses compile original data for improving fungal … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …

… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … massive problems just as much as it brings about massive data into really interesting ways to look at our systems. …

The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … Vice-Chair will be elected. The Chair is responsible for preparing the agenda of UEC meetings in coordination with …

The Community Science Program (CSP) provides the scientific community at large with access … sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  …

… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of … sampling of fungi, laboratory analysis and genomics data exploration. … The Mycocosm web portal provides data …