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… of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … of biosynthetic gene clusters. But with all of the other IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And so yeah, we …

… hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators … hours.   FY 2023 DOE Metrics There were 2,373 unique* JGI users in FY2023 , which includes Principal Investigators …

… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the most important to DOE mission …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …

… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … a long time.  MARCY: It will. Are you going to solve it at JGI?  DAN: No.  [LAUGHING]  ALISON: Don’t shortchange JGI!  …

… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … to the Primer episodes, then you heard me talk about JGI’s Earth Secondary Metabolome initiative, and our … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain …

… can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … And that’s related to what my project is with the JGI. Where, it’s again, with ribosomal peptides, we’re … DAN:  Yeah. Do you want to talk a little more about your JGI project?  ERIC:  Sure. So with that project, we’re …

… The JGI is leveraging its current partnerships to offer new … Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank … with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure …

… Selected Publications …

… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible … through a kingdom portal (assemblies + annotations) For IMG & Mycocosm: Data that is associated with an ITS project … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …