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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … been a principal investigator (PI) on an approved JGI proposal. Approved proposals make use of JGI’s breadth …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … So we’ll talk about those kinds of terms when we do our primer, podcast. Welcome, Mark. MARC: Hi yeah. Great to be … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and …
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Natural Prodcast Episode 8: Eric Schmidt
… can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … one of the things that he looked at – that it’s easy to fall in love with because the creatures are very … you describe the project. Could you just give a short primer for someone who is familiar with biology, but not …
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Viral Genomics Group
Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host … Opinion in Virology .  49 , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions — how big (or small) can tailed … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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CSP Large Scale Call
… that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … review process .  … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available …
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Natural Prodcast Episode 16: Marcy Balunas
… standard kinds of things and natural products definitely falls outside of that. And so, for me, I think the next step … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t …
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Natural Prodcast Episode 11: Marnix Medema
… of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And so yeah, we … I’m going to start. We talked about this when we did the primer episode, we talked about genome mining through some …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to …
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User Advisory Committees
… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of … 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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