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… activity. So the chemistry and function really of those microbes that live there.  And in our work we’ve determined … bobtail squid, it’s doing some sort of interaction with its microbes that it’s getting.  But yet the organisms are … small molecules that host make as well. And so hosts and microbes and just the interaction between them to produce …

… and dynamic metabolite networks of environmental microbes and how they transform their environment. Research …

Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics … design efforts. … PhD Applied Mathematics University of Washington, Seattle BA Applied Mathematics University of …

Brad: Yeah, for sure. So we’re going back to the mid-late ’80s. And at that time, you know, it’s before genomics … synthesis, the area of discovery, was just budding in the 80s. So that was pretty special. And for someone like … systems. No one was, at that time, really working with microbes from the ocean. So I felt there was a wonderful …

… for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE … JGI metagenome workflow . mSystems 6(3). 10.1128/MSYSTEMS.00804-20 Nayfach S et al.  A Genomic Catalog of Earth’s … Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and …

… techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those …

… is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to … You don’t have tunnel vision anymore, only seeing the microbes you can grow in the lab — suddenly you see … — like anaerobic respiration, or fermentation.  “Both these microbes are capable of other ways to conserve energy,” …

… metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our conversation … … Episode Transcript …   … This is the website for Episode 8 of JGI’s Natural Prodcast, which features our conversation …

Microbes drive critical ecosystem functions and affect … standing virus-host interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as … and archaea across Earth’s biomes. Nature Microbiology. 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about …