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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for … for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is a legally binding … After your proposal is approved, the Contracts Officer will send required paperwork to your institution. (Samples …
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What Happens To a Rainforest When You Dial Up Drought?
… key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at what happens to that storage when a rainforest hits a drought. Tag along with their …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The … and 2016, Hallam and his colleagues collected more than 270 water samples. Genomic DNA extracted from the water … the G. Unger Vetlesen and Ambrose Monell Foundations, the Natural Sciences and Engineering Research Council of Canada, …
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JGI Advisory Committees Code of Conduct
… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values , which guide the relationships we nurture in our workplace and seek to establish with our …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell … candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial …
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Viral Genomics Group
… ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … Viral Genomics group attempts to address this question in natural soil ecosystems by combining metagenomics with other …
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Uncovering Novel Genomes from Earth’s Microbiomes
… most diverse range of samples and environments, including natural and agricultural soils, human- and animal-host … talk about genome mining using the GEM catalog in  this episode of the JGI  Natural Prodcast . Using this massive dataset, Nayfach clustered the …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … can take advantage of existing methodologies developed for natural languages to study genomes,” Wang explained.  And … assembling over 220 Tb of sequences and obtaining 700 Gb of assemblies. The team skipped the binning process …
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Len Pennacchio
… on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint … at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC … 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a rare form of human …
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Gut Fungi: Unexpected Source of Novel Chemicals
… don’t have the energy to make complex compounds called natural products . Yet, combing through the genomes of four … californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department … of the JGI Metabolomics Technology Group, with scientists Ben Bowen and Katherine Louie conducted mass spectrometry …
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Supporting Global Research into Actinomycetes
… of actinobacteria Streptomyces is more than just a funny word. The 500 species described within the group are … ( Hear ActinoBase’s site editor  Kate Duncan in the JGI Natural Prodcast podcast , where she talks about this community … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to …
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