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Project Management Office
… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the submission of samples for sequencing, or the …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … computational method for improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been …
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Bioreactor microbial ecosystems for thiocyanate and cyanide degradation unravelled with genome‐resolved metagenomics
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Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales
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Host-specific and tissue-dependent orchestration of microbiome community structure in traditional rice paddy ecosystems
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how … and DBI-2047598 to K.A. We thank the Department of Energy Joint Genome Institute (Community Science Program award 339, …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health … do on the leaf surface. More specifically, they found that microbial community composition and functional potential … taxonomic makeup and functional potential of needle-surface communities.  Part of the work was done through a summer …
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Metabolic dependencies govern microbial syntrophies during methanogenesis in an anaerobic digestion ecosystem
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Ecological Assembly Processes Are Coordinated between Bacterial and Viral Communities in Fractured Shale Ecosystems
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … environments and grouped those with similar microbial communities together. Those similarities, based on their …
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A sweet spot in marine ecosystems
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