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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and … Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., … types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from …
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Natural Prodcast Episode 5: Brad Moore
… genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …
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Project Management Office
… Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager … Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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DNA Synthesis Program
… cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host … genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in fungal-host interactions and … plants (endophytes). These include genes that degrade plant cell walls and break down plant sugars. The results also …
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Viral Genomics Group
… at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … these omics data must be complemented with single-cell resolution assays that can be targeted towards specific …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Extensive epigenetic reprogramming during the life cycle of Marchantia polymorpha
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Natural Prodcast Episode 16: Marcy Balunas
… to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … Nyholm has been working on the accessory nidamental gland or ANMG. And the ANMG is a second organ.  And so this … Do you think that they always cluster or could the genes be separated on a genome?  Dan: Oh yeah. It’s biology …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … in most fungi, biosynthetic gene clusters, which are the genes that do the biosynthesis of a secondary metabolite, … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …
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CSP New Investigator Call
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Fungal & Algal Program
… functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant biomass. These abilities are crucial for sustainable plant biomass production as well as converting biomass into …
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