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… genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …

… cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and …

… Uncovering associations between plant roots and fungi that can help or harm plant host … genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in fungal-host interactions and … plants (endophytes). These include genes that degrade plant cell walls and break down plant sugars. The results also …

… at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … these omics data must be complemented with single-cell resolution assays that can be targeted towards specific …

… to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … Nyholm has been working on the accessory nidamental gland or ANMG. And the ANMG is a second organ.  And so this … Do you think that they always cluster or could the genes be separated on a genome?  Dan: Oh yeah. It’s biology …

… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … in most fungi, biosynthetic gene clusters, which are the genes that do the biosynthesis of a secondary metabolite, … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …

… functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant biomass. These abilities are crucial for sustainable plant biomass production as well as converting biomass into …

… molecules obviously play a huge role in ecology through cell-cell communication, chemical warfare, and symbiotic … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating … RNA alongside. That really helps us to determine where genes start and end and really help improve our annotation. …

… So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … coelicolor versus Streptomyces lividans. They both have the genes. The genes are pretty much 100% identical. We don't know why one …

… the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … applicable for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” …