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JGI@25: Cow Rumen and the Early Days of Metagenomics
… processing these sturdy materials, rumen microbes and their enzymes are an optimal study subject that could lead to more … involved in the digestion process.  “We wanted to find the enzymes that make the rumen such an efficient … “The ultimate target has shifted from just finding enzymes that produce biofuel, to the general ability of …
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Functional genomic screening in Komagataella phaffii enabled by high-activity CRISPR-Cas9 library
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Toward More Efficient Artificial Photosynthesis
… the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA Carboxylase/Reductase (ECR) enzyme variants. ECR enzymes are capable of fixing CO2 many times faster than … RuBisCo, the most common CO-2 fixing enzyme in nature. The library provided the Erb lab with enzymes that led to …
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Natural Prodcast Episode 19: Bill Fenical
… 20S proteasome. The proteasome in the cell is a bundle of enzymes that is used to degrade proteins, peptides, that are … no nutrients. And we followed cultivations. We set up a library of Petri plates to watch what happens over time. And … check off the time. And here’s all these plates in this library, growing. Watching what would happen over time. And …
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Emiley Eloe-Fadrosh
Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … Data Collaborative (NMDC). … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. Click to learn … information about a single amplified genome (MISAG) and a metagenome- assembled genome (MIMAG) of bacteria and …
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Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics
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New Lineages of Life Group
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Single Cell Research Group
… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …
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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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Natural Prodcast Episode 24: Jackie Winter and SMC
… cool. The vanadium haloperoxidases are some really cool enzymes, and it was fun to see that project take shape. … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … be whatever somebody has submitted to us. It could be a metagenome. We’re going to run metagenomes. That’s going to …
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Targeted Switchgrass BAC Library Screening and Sequence Analysis Identifies Predicted Biomass and Stress Response-Related Genes
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Partnerships: Adopt-A-Genome
… datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other …
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