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DNA Synthesis Science User Advisory Committee
… guidance, and counsel on the effective management and strategic objectives of the programs. The Committee serves …
Learn more
Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and now COVID. We also … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very …
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Single Cell Research Group
… as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential of uncultivated lineages is … reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.” Nat Biotechnol 35(7): 676-683 … Visel A., Woyke T ., Wang Z. & Rubin E.M. Metagenomic discovery of biomass-degrading genes and genomes from cow …
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Natural Prodcast Episode 5: Brad Moore
… chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … that then has a big impact. You know, when these toxins are released, and they get into the environment you mentioned, …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … for a sustainable bioeconomy ” — as articulated in our new Strategic Plan , which was released in April 2024 — through … data easier to access and use, and by investing in the latest advanced genomic capabilities to remain innovative …
Learn more
FICUS Overview
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides … with PIs (including JGI scientists as needed), and the work plan is written into a Statement of Work document. … What …
Learn more
Frequently Asked Questions: Project Management
… products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … Phycocosm (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: … (Phycocosm) … In general, data generated by the JGI are released to the public via JGI portals and the NCBI a year …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … with PIs (including JGI scientists as needed), and the work plan is written into a Statement of Work document. … For … projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to tear it up. I’m super … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …
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Sequencing Technologies
… next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … investigator on any proposals previously accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be … proposal noted, are believed responsible for a fifth of the planet’s photosynthesis activities. Aside from being a key …
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