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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
Learn more
How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly with specific universities, continuing education programs in the Bay Area, and … in enabling complex biological and environmental systems research.  … The JGI and UC Merced have had a long-standing internship …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … and secondary metabolism over the last decade or so. He’s involved with a lot of the common tools that genome miners … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … in Germany. Like me, she’s a genome miner and has been involved with the AntiSMASH and MIBiG projects. And I found … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … single handedly, right? So, yeah, getting the community involved. This is definitely where things need to go. …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … my husband’s love and care. Yeah, and let’s see. I lead a research group at Emory, I teach classes here on food and … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very …
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Partnerships: Myco-Ed
… and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … data analyses compile original data for improving fungal genomic resources empower students through isolation and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … go to the proposal submission page , login using your JGI account (create one here if you don’t already have an …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their … recover post-wildfire . He and  Tringe were also involved in a study that applied metagenomic capabilities …
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