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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new … resource where data from different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank enables predictive ecosystem …
Learn more
How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … the process. If you have any questions, please contact your Project Manager or jgi-project[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …
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Natural Prodcast Episode 5: Brad Moore
… enjoyed what he was doing so I wanted to be part of that discovery, and that magic that he was showing, and in his … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I …
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Natural Prodcast Episode 11: Marnix Medema
… the professor was actually quite enthusiastic about the project and he arranged funding to do it nonetheless from … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … relates to a whole different field like computational drug discovery field, which has been quite distinct from the …
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Natural Prodcast Episode 20: Brian Bachmann
… and he’s doing some amazing research in and around drug discovery, which includes screening methods, genome mining … you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk … we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben …
Learn more
Natural Prodcast Episode 2: The Primer, Part 2
… metabolism, has been … not dominated by, but driven by drug discovery. We know that many natural product molecules are … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
Learn more
JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … help solve energy and environmental challenges. The 1KFG project represents affiliations at over 180 organizations in … for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these initial efforts: Spatafora …
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Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … Bill Gerwick as part of the International Biodiversity Drug Discovery consortium doing natural products … and doing medicinal chemistry, doing development of projects on a project-by-project basis. And the more time …
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Fungal & Algal Program
… genomes to support both basic research and applied science. By advancing fungal and algal genomics, the program … dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
Learn more
Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of … with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It …
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Natural Prodcast Episode 3: The Primer, Part 3
… the modern, post-golden age history of natural products discovery, and we’ll talk a lot about the current state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic …
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