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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … educators from a broad range of disciplines up-to-speed with some of the latest developments in microbial genomics, …
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Natural Prodcast Episode 11: Marnix Medema
… pathways. And today, we get to present our conversation with Marnix Medema , from Wageningen University in the … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … antiSMASH, and I thought that was really a nice example of teamwork and combining things that another group has …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. …
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FICUS Overview
… increasingly collaborative and multidisciplinary nature of DOE mission science projects, this initiative aims to … Previously, researchers had to apply to each facility with separate review schedules and selection processes, … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy today to be handing over our interview with Dr Elizabeth (or Betsy) Parkinson from Purdue … bit of entomology as well. DAN: Right. Yeah. No, yeah, Bill does it all. A lot of people I think-- well, maybe I'm …
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Natural Prodcast Episode 22: Alison Narayan
… earlier this year. And today we have our conversation with Professor Alison Narayan, from the University of … perfect timing for an October podcast release. I hope that doesn’t get me canceled.The monthly schedule seems to be … with that class of enzymes call themselves the non-heme team. JACKIE WINTER: Do they have shirts? ALISON NARAYAN: I …
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Natural Prodcast Episode 20: Brian Bachmann
… First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s … at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and I’ll … this podcast rolling again. I’ve committed to the JGI Comms team, and, therefore, to you, to put episodes out monthly, …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem …
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Sequencing Technologies & Products
… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … Group, which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … An assay used for profiling transcription factor binding sites across entire genomes. This technology has …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence … metabolism – field, though, is real, and it’s a field with very real and truly amazing science with a long … Episode Transcript … and start to cover the basics in this field. This, along with parts 2 and 3, should be a great place to start if you …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized … The majority of JGI projects come from the user community. Find out about …
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Natural Prodcast Episode 9: Roger Linington
… in making this happen. We had a really fun conversation with Roger about all this, in terms of how to build an … to that here in North America. ALISON:  Yeah, and it does sound like your career has incorporated a lot of … literature. So that’s run by Marnix Medema and his team at Waginingen. And they have been extremely successful …
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