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… Informatics Officer. JGI’s Portals, including Phytozome , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers … with the intent of eventually transitioning to work on IMG and GOLD,” said Steve Wilson, head of the JGI’s Systems … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …

… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are … The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was … of Energy, Office of Science, Office of Biological and Environmental Research (BER) (89233218CNA000001 to L.A.N.L., …

… The IMG/M system serves as a community resource for comparative … three domains of life, in a uniquely integrated context. IMG/M provides tools for analyzing the functional capability … the context of reference isolate genomes included from the IMG/M system. … IMG/PR is a plasmid genome resource featuring the largest …

… to long-read metagenome assemblies by JGI and uploaded to IMG? A:  Depending on the project setup, we can include as … Integration of this type of “external mapping” into IMG is currently being revamped but we can already provide … offer long-read metatranscriptome? (for e.g. full 16S, RNA virus, etc) A:  Long-read metatranscriptome / RNA …

… through a kingdom portal (assemblies + annotations) For IMG & Mycocosm: Data that is associated with an ITS project … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …

… to develop complex structures and adapt to changing environments — ultimately allowing them to adapt to life on … an ancient genetic framework to thrive outside aquatic environments. The Impact A deeper understanding of how plants … algae, which were isolated from diverse freshwater environments. Arising in tandem from the same ancestor, these …

… databases and recovered more than 3,000 others from environmental datasets. All of the annotations and data  are … reference set, using two additional approaches. To search environmental data, they developed a two-stage metagenomic … over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial ribosomal RNA sequences. The …

… of evolution allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … ) supported by the Office of Biological and Environmental Research of the DOE Office of Science through …

… rich metabolite profiles from diverse biological and environmental samples by using advanced computer analysis …