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Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE …

Udwary talks to luminaries in the field about current and future developments, and how the JGI can be part of that …

… standing virus-host interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as … archaea across Earth’s biomes. Nature Microbiology. 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …

… — and literal — roots could play a big role in our energy future. …

The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …

Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact … change etc) and structural rearrangements, alignment files 384/454 Fungal Transcriptome RNA for expression profiling and …

… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Cole and their team found over 1,000 upregulated genes, 188 of which were shared with previous studies in the same … focused on a relatively well-understood model system, so future directions will also include targeting biofuel …