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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … values, which guide the relationships we nurture in our workplace and seek to establish with our … the JGI user community and is responsible for providing input and advice on JGI policies and practices that …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … what we’re calling a Primer. We wanted to try and give a general audience some of the basics of natural products … where this happened have a tendency to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps …
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Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression
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Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential … of its kind ever assembled. The team identified 15 core genes shared across all fungi, and found that some of these …
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …
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Identification and Classification of Fungal GPCR Gene Families
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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The quantitative genetics of gene expression in Mimulus guttatus
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … to white rot fungi. Additionally, some of the saprotrophic genes found in the mycorrhizal species, such as nutrient … of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & 1974). This research was …
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