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Fungal Friends or Foes in Plant Roots
… associations between plant roots and fungi that can help or harm plant host health. The Science Researchers … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … deliver those nutrients to tree roots and soil. These fungi help shape a forest’s ecology. They store carbon and cycle …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced … Dothideomycetes genomes were conducted as part of the 1000 Fungal Genomes Project supported by the JGI Community …
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Natural Prodcast Episode 9: Roger Linington
… episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British … products. So you know, for example, what are all the compounds in a sample set, and how are they distributed? And … to collaborators and say, “This is a prototype. If you will help, we could do this in a more sophisticated way.” And …
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Industry Engagement Program
… than 2,500 users that predominately come from the public sector: academic and government institutions — with … largely unknown and underutilized by industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with … him 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the …
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Frequently Asked Questions: Proposal Submission
… successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national … Access to the Molecular Foundry and use of JGI capabilities is … they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering the costs of the …
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Webinars on Offerings & Capabilities
… Below are a list of webinars that can help you through the submission process by better … here . You can find additional webinars covering how to use our data portals here.  …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … that I’m working with about now. I made a tree of different compounds, and I’d looked at it from an evolutionary … different fields with different views, that really then helps you to get back to, oh, why am I actually studying …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel at recycling … machinery harvests sulfur from gaseous organic sulfur compounds in the atmosphere.  Beyond bacteria, this … focus area of the JGI’s DNA Synthesis Science Program help advance DOE interests in the biotechnology innovation …
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User Advisory Committees
… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … the relationships we nurture in our workplace and seek to establish with our stakeholders. The guiding principles … and the annual meeting. The UEC also acts as a liaison to the user community and the broader scientific community, …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … whose biomass can be renewably converted into energy or biofuels. Although a member of the grass family, as its name … genomes respond to extra chromosome and gene copies, will help researchers improve Miscanthus breeding programs. The …
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