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… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass … the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a …

… team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The … is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … Department of Energy’s goal of producing sustainable fuels from alternative sources. Moreover, the team says the …

What if we understood plants and how they adapt to their ever-changing … and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton …

… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of different organisms that …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in … LB et al. (2017) A thermostable Cas9 with increased lifetime in human plasma.  Nat Commun . 8(1):1424. Sczyrba …

… delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular … other technological advancements that facilitate the shift from uncovering microbial novelties to deciphering metabolic …

JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … interactions with their environments and with each other, from defending against predators to aiding in symbiotic … biosynthetic gene clusters (BGCs) across all kingdoms of life. Tools are provided to display annotation data from …

… in firmly in the chemistry bucket. [LAUGHS] I don’t know that that’s ever necessarily like a good description of anyone … in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … that there wasn’t enough application there. And so I moved from there to plant natural products, getting a PhD in …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so …