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Disclaimer
… or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, … that its use would not infringe privately owned rights. … Reference herein to any specific commercial products, … name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, …
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Micro-Scale Applications Group
… makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated …
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Special Initiatives & Programs
If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for BERSS support through the JGI … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … was not previously negotiated with the JGI will only be accepted pending available capacity, technical review and …
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New Lineages of Life Group
… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of …
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Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1)
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Synthetic Biology Informatics Group
… tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination … Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well …
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Microbiome Data Science Team
… genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature … Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from the human gut microbiome. Nature … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …
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JGI@25: Studying Sorghum’s Survival Skills
… but other important crops as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 …
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Natural Prodcast Episode 20: Brian Bachmann
… two things I wanted to tell you about in this introduction. First and foremost, our interview this week is with … schedule, I’m committing to it, and you all can hold me accountable and yell at me if I slip again. My JGI coworkers … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I … natural product biosynthetic pathways, which led her to a successfully funded JGI CSP project. And we also got to talk … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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Natural Prodcast Episode 16: Marcy Balunas
… based in Panama and was dual there and at Scripps where I first met Dan. I think you were almost finishing when I was … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … of her work on molluscs and their cyanobacterial feeding preferences A 10″ Simple Rules” article on increasing …
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Natural Prodcast Episode 14: Nigel Mouncey
Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve done since that first … One is Spinosad. Its a natural fermentation product of Saccharopolispora spinoza . And the other is spinetoram which … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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