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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … microbes and how they transform their environment. Research Team    … For further details, please reach out to the Group …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google …
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Strain Engineering
The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … strains for elevated opportunity for expression. Research Team    … For further details, please reach out to the Group …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about natural products and the science and scientists of secondary metabolism. Welcome back for our second season … uses, is called antiSMASH . And it is another community effort that’s been built up over the years and is really …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  … as well as provide process automation support Research Team    … For further details, please reach out to the Group …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … group also hosts the Viral Genomics group . Research Team    … Nayfach S et al.  A Genomic Catalog of Earth’s …
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User Support Analysis Group
… epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing … projects to demonstrate new genomic capabilities. Research Team    …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing … and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan to begin to link …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with … that we are citing, but it’s more of an intellectual effort to better understand secondary metabolism — is that …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … Communications by an international, multi-institutional team. The work was a joint effort led by scientists at the  Center for Advanced …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an … to get this thing done, working with our pretty small team that’s put this together. There’s only a few of us. …
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