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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … fungi suggested that there were multiple flagellum loss events during the diversification of terrestrial fungi, … that there were a series of rapid diversification events when fungi first invaded land. Intuitively, it makes …
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The More the Merrier: Making the Case for Plant Pan-genomes
… multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while … the polyploid  B. hybridum formed more than once, and these events took place a million years apart: the individual with …
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Computationally Classifying Fungal Lifestyles
… (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, … and also provides more information about speciation events. … The work conducted by the U.S. Department of …
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Partnerships: Myco-Ed
… ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ …
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Plant-Microbial Interactions Group
… patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 …
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Forming Scientific Connections and Building Community
… intern means going to the workshops and listening to the speakers talk about their own experiences and what their …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … the subgenomes we came up with a simple series of events leading from multiple small wild strawberry species …
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JGI Portals
… and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale experiments in …
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Natural Prodcast Episode 23: Aaron Puri
… was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … access to the whole sigma catalog of precursors in their 12C form. You can feed those and look for incorporation in …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, … efficient at photosynthesis, a concern as extreme weather events become more frequent. “A big part of the Danforth …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… broad distribution indicate multiple, independent origin events? Do the cytotypes react differently in response to …
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