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… The Secondary Metabolism Collaboratory encourages user … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. …

… and other tools. By bringing users together through our systems, we build far-reaching communities of researchers to … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that … from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are …

… Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. … A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ Missing microbial eukaryotes and misleading meta-omic conclusions …

… And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

… As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And … to unpack experimentally. But there’s a couple of different systems where people have made strides in that area. Where I …

… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …

… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …

… offered, proposal review procedures, and the annual user meeting. The UEC also acts as a liaison to the user … for session themes and speakers for the annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; Communicate …

… the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … functional genomics, focusing on developing genetic systems that can address global energy and environmental … cycle, helping researchers optimize genetic systems. By enabling these cutting-edge approaches, the …

… offered, proposal review procedures and the annual meeting. The UEC also acts as a liaison to the user … The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as …

… in studies of complex biological and environmental systems. We optimize our service to the community through … crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and … and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to recover, reuse, …

… and using engineered biosynthetic pathways and enzyme systems to do synthetic analoging of some really complex … And I’m also dying to talk in more detail about the JGI Secondary Metabolism Collaboratory , which is the big huge … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …