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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … want– if you want– if you really want to, you can do heterologous expression. You can do homologous expression techniques and stimulation techniques and …
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JGI Portals
… and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The … to assess absolute time estimates for major colonization events. It was previously assumed, due to the wide and … closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean occurring within the last …
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Integrating Experimentation with Data
… sessions, thought-provoking flash talks, and instructive workshops. Researchers from academia, government, and …
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When “The Blob” Made It Hotter Under the Water
… of how marine microbial communities are affected by warming events. More time-series studies could help researchers … temperatures rise, so do instances of extreme weather events such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third …
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IMG/M: a data management and analysis system for metagenomes
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and … of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which … in genome projects and organized numerous genomics workshops. … Igor Grigoriev is the Fungal & Algal Science …
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Natural Prodcast Episode 22: Alison Narayan
… has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our product, and one of those oxygen atoms from O2 ends up as a molecule of water. DAN UDWARY: Mhm. So … Chemoenzymatic Tropolone Synthesis”, (preprint)  ChemRxiv.  2023.   doi: 10.26434/chemrxiv-2023-lvngd “Enabling Broader …
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IMG/M 4 version of the integrated metagenome comparative analysis system
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Microbial Program
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Natural Prodcast Episode 18: A CSP Primer
We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual … call where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a … is over, the data gets released on our portals, such as IMGM. But we also then push the data to GenBank. So the raw …
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UC Merced Interns Reflect on Their JGI Summer Projects
… remotely due to COVID-19 restrictions, but virtual events and technology enabled a fruitful experience for … and GitHub enabled virtual collaboration. JGI also hosted events to enable students to showcase their work and even a … summer. The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a …
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