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When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank …

… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both …

Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: … in that area?   NANCY: Oh, well, I love fungi, okay, this doesn’t even have anything to use natural products … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …

Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, …

… in the School of Medicine and College of Arts and Sciences. She’s an ethnobotanist and the herbarium curator … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … And just because you do a field study in a location doesn’t mean that you’re going to have this massive economic …

… including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … request a JGI Single Sign On account at https://signon.jgi.doe.gov . This account can then be used to submit proposals, …

… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … transcripts, and show notes with links to papers around the science we talked about, at natural prodcast dot com. So, … bit of entomology as well. DAN: Right. Yeah. No, yeah, Bill does it all. A lot of people I think-- well, maybe I'm …

Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey … metabolite peptides. And there are two ways that nature does this. The more well-known secondary metabolism systems … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as …

Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …

… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has … significantly lowering costs. Staff process samples, perform quality checks, and prep libraries for sequencing. They …