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Data Policy
… For DNA synthesis projects: data are subject to a  two-year … Inventory of Composable Elements (ICE) repository and/or DNASU Plasmid Repository) at the end of the embargo period. … or citation of accession numbers in a peer-reviewed journal, or any public deposition of the data at outside …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections … They sampled soils in four forest ecosystems, extracted RNA to understand gene expression, and developed new tools … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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From Competition to Cooperation
… than had ever been done before to look at how multiple forest fungi have independently evolved to establish … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA synthesis and assembly group: Our production group … on developing methods for converting digital information from sequence databases into biotechnological or …
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Natural Prodcast Episode 2: The Primer, Part 2
… is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … of primary metabolism. So a lot of the genes and the DNA that’s used for secondary metabolism, they are copies … products because they’re easy to find. They grow in the soil. These are the same guys that produce geosmin. And so …
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Examples: Successful LOIs & Submissions
… calls. These documents have been shared with permission from the PIs who drafted them.  … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic …
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Homepage
… Our homepage video includes external footage from: University of Delaware; Laura.Selbmann©PNRA. All the … isolated are preserved in the Culture Collection of Fungi from Extreme Environment, the Italian National …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough plant … and nitrous oxide). Summary To do this work, the international scientific team led by Petr Baldrian of the Czech … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences …
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Natural Prodcast Episode 8: Eric Schmidt
… week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … and so on that we can consult in designing pieces of DNA that we can use to test these issues. The second area … to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …
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Natural Prodcast Episode 9: Roger Linington
… from the ICBG training program, which stands for International Cooperative Biodiversity Groups, and it’s this … resources which provide large, high quality, well curated datasets upon which to base those sorts of tools. So I think … to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …
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Who We Are
… through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and … was created in 1997 to unite the expertise and resources in DNA sequencing, informatics, and technology development …
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Natural Prodcast Episode 3: The Primer, Part 3
… maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … 80s and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – … produce secondary metabolites. Do you recognize this? DNA 🡺 RNA 🡺 Protein ALISON: This is central dogma. DNA to RNA to …
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