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… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how … partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial …

… challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … supports the development of next-generation biofuels by studying perennial grasses and fast-growing trees as … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …

… ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … UCSD Undergraduate Scholarship, 2003 and 2004 UCSD Study Abroad Scholarship (James Cook University, Australia), …

Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) …

… … Information on Software Looking for information on our software, including BBTools ? Click to find that on …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … I’m definitely seeing why this is such an important area to study. Okay, what’s your third story?  DAN: The third story … ALISON: Hmm, yeah, I guess this relates to when I was studying heterotrophic bacteria: the core genome and the …

Journal publication caps JGI pilot project with fledgling Florida high school … system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, … this because we have the resources as a user facility. The Metagenome Program team provided guidance and encouragement …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts to do so, …

The Scientific Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and … SAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the … of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with …

… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole “on-time thing” a habit! I’m really not good at that, you …

Biology is currently experiencing a revolution brought on by rapid developments in genomics and other … al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . … 8(1):1424. Sczyrba A, et al. (2017) Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics …