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… yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional … strains represent an additional phase of user-accessible project types, in which DNA-based molecules can be …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … is challenging and often results in highly fragmented data, which limits the ability of researchers to accurately … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of …

… interactions occurring in microbiomes, these omics data must be complemented with single-cell resolution assays … to the development and maintenance of a number of viromics tools and resources. The main focus of these resource … phage proteins user-friendly integrated pipelines (MVP) and databases (IMG/VR) for viromics analyses …

… technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics … Officer. JGI’s Portals, including Phytozome , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique …

… Program Large Scale call is focused on genomic science projects that address biological functions for … aspect of these mission areas, priority will be given to projects that address the areas of special emphasis that are … for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of …

… SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … of always working on natural products but just different tools and how to really access and manipulate these pathways … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …

… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … others: indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication requirements. … from the approved start date. Additional time requires the Project Manager’s approval. An amendment to extend the …

… and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides customized …

… Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and … (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close …

… help solve energy and environmental challenges. The 1KFG project represents affiliations at over 180 organizations in … Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. … exploration of ecology-related groups of fungi. The 1KFG project has brought together over 400 proposal collaborators …

… miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … more into the meta genome mining. We started to build the tools for natural product researchers that easily can …

… for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, … accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …