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Partners
Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close …
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Institutional User Agreements
… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … others: indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication …
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Meeting Code of Conduct
All participants are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger …
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CSP Large Scale Call
… for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of … questions, please reach out to Christa Pennacchio, Project Management Office. For questions about the appropriateness … any questions prior to proposal submission.   … Additional Resources …
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CSP New Investigator Call
FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the … questions, please reach out to Christa Pennacchio, Project Management Office. For questions about the appropriateness … any questions prior to proposal submission.   … Additional Resources …
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How to Submit Sequencing Samples
… please contact your Project Manager or jgi-project_management@lbl.gov . … 1) Review JGI sample QC requirements … for sample collection and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and … GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or …
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Science Programs
… approaches for and with users, and create computational tools and resources for them. Their concerted efforts help maximize …
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Prokaryote Program User Advisory Committee
… to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and … to render advice, guidance, and counsel on the effective management and strategic objectives of the Program. The … relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ …
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Products
… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. … on genome characteristics, availability of external resources and project goals. Selected genomes will be …
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The JGI Leadership Team
… is responsible for institutional strategic planning, talent management, and convening of advisory committees to guide …
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Leadership
… is responsible for institutional strategic planning, talent management, and convening of advisory committees to guide …
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MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources
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