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Project Management Office
See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  … Before work … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …
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Natural Prodcast Episode 11: Marnix Medema
… center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, … products. And they built a few of these very reliable support-vector machine learning models that we were able to …
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Natural Prodcast Episode 12: Nadine Ziemert
… much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … of searching the internet, searching literature, and making databases. Because that’s what I noticed is really a … more into the meta genome mining. We started to build the tools for natural product researchers that easily can …
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Plant-Microbial Interactions Group
… by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … characterization methods, in addition to bioinformatics tools to elucidate phage function in this tripartite … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the …
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Products
… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. … (single organism). Note: smRNA sequencing is no longer supported. For annotation: de novo assembly. For counting: …
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Integrating Experimentation with Data
Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle Marriott … systems using advanced experimental and informatic tools at no cost. The JGI and EMSL are supported by the DOE's Biological and Environmental Research …
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Frequently Asked Questions: Proposal Submission
… call link to see specific details including project types supported, sample/capacity limits, and instructions.  Many … begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to … advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to synthesized DNA …
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Natural Prodcast Episode 6: Marc Chevrette
… and I’m really excited about it. Because now we have the tools through genomics, and metabolomics, to ask these … for a company. Personally, that was my first taste of big data if you want, maybe it’s medium data now. But at the time, it was big data. And yeah, trying …
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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Partnerships: Adopt-A-Genome
… to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization and … Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative analysis, and …
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FICUS Overview
There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides customized …
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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