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Single Cell Research Group
… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. … E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 (2006). …
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Special Initiatives & Programs
… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted …
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Mission
… JGI users explore beneficial plant–microbe interactions and nutrient cycling to enhance crop resilience, improve soil health, and …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … unknown. And so we've done the sequence similallity network analysis where we look for other receptors with sequence … Yeah, so that's a new JGI project. Just came out from a CSP this year. BETSY PARKINSON: Yes. DAN: So how long do you …
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Natural Prodcast Episode 23: Aaron Puri
… was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … by Inverse Stable Isotopic Labeling . ACS Chem Biol. 2021 Aug 20;16(8):1332-1338. doi: 10.1021/acschembio.1c00329. …
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DNA Synthesis Program
… IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … web portal provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … global metagenomes (within IMG).  The Impact The initial analysis highlights abundances of gene annotations that provide insights into the nutrients that are being used and cycled in different …
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Natural Prodcast Episode 5: Brad Moore
… Pacific Ocean, or in the bay, and be able to do chemical analysis, as well as transcript analysis. And what we’re … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … development enrichment activities. For some students in the 2021 cohort, this was their first internship experience, … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes …
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Approved Proposals
… previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations …
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Natural Prodcast Episode 20: Brian Bachmann
… thought, well, let’s see. But they’re also very, very low nutrients. So, they’re hypercompetitive. So our argument was … human has ever tread And that there’s very, very, very low nutrients down there. And most of the energy is coming from … of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these …
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JGI announces 2023 CSP Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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