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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … Yeah, so that's a new JGI project. Just came out from a CSP this year. BETSY PARKINSON: Yes. DAN: So how long do you …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. … for 3 years with the possibility for extension. Fungal genomes, for instance, can take up to a year or more to …
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Natural Prodcast Episode 19: Bill Fenical
… seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … the complex biology and production that we couldn’t do. So 2021, we have two drugs in late phase III, both for cancer. … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass … a JGI Engagement Webinar on How to Successfully Apply for a CSP Proposal. She also co-organized the NeLLi 2021 …
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Approved Proposals
… previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations …
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Natural Prodcast Episode 23: Aaron Puri
… And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these bacteria … by Inverse Stable Isotopic Labeling . ACS Chem Biol. 2021 Aug 20;16(8):1332-1338. doi: 10.1021/acschembio.1c00329. …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … development enrichment activities. For some students in the 2021 cohort, this was their first internship experience, … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes …
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Natural Prodcast Episode 20: Brian Bachmann
… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … around drug discovery, which includes screening methods, genome mining in cave microbiomes, and using engineered … was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really happened yet. It was …
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Offerings & Capabilities
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … And then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …
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Sequencing Technologies & Products
… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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2021 Progress Report
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