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Natural Prodcast Episode 13: Francisco Barona Goméz
… of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … usage. And I was recently challenged on that on Twitter by Francisco Barona-Gomez. And so he is here to, at least, … a look at EvoMining, the non-homology-based genome mining software we mentioned: “ EvoMining reveals the origin and …
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Tracing the Evolution of Shiitake Mushrooms
… of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  … these fungi play a role in the global  carbon cycle . As decayers, Lentinula fungi access carbon previously locked … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome …
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Significant Alteration of Gene Expression in Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium by Plant Species
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute … recognize the need to have a limited and time-sensitive protection of certain types of data to support their use by … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science …
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JGI on the 2020 Highly Cited Researchers List
Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields … JGI are: Kerrie Barry I-Min Chen Igor Grigoriev Jane Grimwood Natalia Ivanova Nikos Kyrpides Dan Rokhsar Simon Roux …
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Natural Prodcast Episode 14: Nigel Mouncey
… with my boss, JGI Director Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve … of things. Full stretch all the way from a well into microtiter plate all the way up to supporting 200,000-liter … which, at least at the time, was called Inatreq . It’s a fungicide that is active against Sartoria which is a really …
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Community Science Program
The Community Science Program (CSP) provides the scientific community at large with access … of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that … synthesis, metabolomics and analysis will be performed by the JGI at no cost to the user. … All proposals first …
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Approved Proposals
… previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations …
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Natural Prodcast Episode 15: Katherine Duncan
… people that wants to study oceanography and was fascinated by the oceans, though I’ve always lived by the sea in the … any actinomycetes, knows that there’s a bible by David Hopwood. I referred to it as a bible because anyone that does … experimental protocols, media recipes, plasmid maps, useful software tools, and more. We didn’t discuss it here, but you …
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Natural Prodcast Episode 12: Nadine Ziemert
… around us. And we actually don’t know a lot about them by their mate, what their role in nature, how have they been … have, right? He was looking for a postdoc and just wrote an email to everyone. And I’m like, oh, I’m looking for … to– DAN UDWARY: Yeah, that’s always a problem in academic software development. NADINE ZIEMERT: Yeah. And I think, …
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JGI announces 2023 CSP Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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Proteome of the Wood Decay Fungus Fomitopsis pinicola Is Altered by Substrate
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