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… that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … of many different things in microbiology and biology in general. And her efforts first at Yale and now at University … this and deal with it is through these antibiotic- or antifungal-producing bacteria that live on the exoskeleton of …
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… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether … said, the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The …
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Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … enabled in part through JGI’s Community Science Program (CSP) , as several approved proposals have contributed toward …
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The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional exploration. The developed …
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… calls. Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie …
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… of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … I could see a certain time span within these biosynthetic gene clusters. There’s gene fusion going on, and then I … like Streptomyces , as well. They have this typical mycelium. But they only grow in saltwater. So we’re thinking …
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… technology to help access complicated natural product gene clusters, and we’re all really excited about that, and … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the … 100,000 bacterial strains, and a hundred thousand fungal strains. And if you believe the prediction that each …
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… at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …
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… other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed …
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… what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … products is that we don’t know what all the biosynthetic gene clusters look like. DAN: For sure. MARCY: We have so … on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product …
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